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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891252.1_cds_XP_016445991.1_40896
CDS Infomation

[gene=LOC107771175] [db_xref=GeneID:107771175] [protein=anaphase-promoting complex subunit 4-like isoform X2] [protein_id=XP_016445991.1] [location=join(49548..49585,50447..50621,50754..50834,51712..51854,52689..52849,52937..53037,53119..53193,53872..54051,55759..55838,55959..56057,56824..56928,62319..62457,63125..63349,63442..63594,68334..68415,68676..68770)] [gbkey=CDS]
Sequence

ATGTTGTGTGTCTCCATTGGGAAGAGCATGGGAAAAAGAGTTCCTAAGATGCCTGGACTA
GTACCTGGGGATAGTGGCTTCATGGATGATGGAGAAGATTCTTTCCAGGAGCTATCAAAT
TCTTCACATCAAAGATATAACATTTTATGCAGCGGGGACATGGATGGAAGTATCTGCTTC
AATATCTTTGGCATATTTCCAATAGGGACAGTTAACATACACAACCTTGTTGTCTCTAGT
TCACTCTCAAGTAGCAATGCTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAGGTGGCC
TTGTCTAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTAATCACAGATGAG
GTTGAACAAGGTGAAGGGCAGCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAACACT
TCAATATTTTCAAAAAGGAAAACTGAACTTCACCAGGTAGCCCAACAGGCTTCCAACATT
GAAGATCTGAGTGAAGTCGTCCGGACATCACTCTCAGTCATGTCTAAGATATGGTCTGAT
GCTATGCACACATTTCACGAGAAGTTCAATACTGTATCGACATTGATCATTGACCATGGA
CTTGACTCTACTCCTCAGGATGAGTTTCTAAGCCTTTTAGGTGGTGCCAGGGCCAGTCCT
CCACTTCATCAGTTTTTAGAAAATTCTCTTGGTGAAGCGGGTCTCAAGCGGGTAGCAAAG
GCAGTTAATGGTGCTGGGAAAGAGCTTCAGCTAATTGTTCTTGATCATTTACAGCCTGCT
GCAGAAATTATTGGATTCAGAATTGGAGAACTGAGAGGGCTTTCAAAATGGCATGCACGA
TATAAAGGTATCGGCTTGGATGAAAAGTTGATGGATAATGCTACGGAAAGGGCTGGCATG
TTACTTGTACAGGTTGAACGTTTTATGAGGGTTTTAGCTTCTGTTGTACAGCAGTTTTCA
AATTTCTTCAGCTGGCTTTTGAAATCTGTGAAGATTCTAATGGCTGAACCAAGTGATCAG
CTACCTTTTAATAGTGAACTTGTTATTATATTCTTGAAGTTCCTATATGATCAAGATCCT
GTAAGGCAGTTACTGGAGATTTCTGAGGGAGATAGCAGCGTTGAAGTAGACCTGGAAATG
ATGCAAAGAATTAAACAACTAGCACATTTCGGAGGGTTTTCAGATTTAGAATATTTGAAA
AGAACACTAGCAGAAGAATTTCAACAAATGGAGTCTTGTTTCAAAGGTGCTTTTGAGATG
CCATTTTCTACTATTTCGGGAAAACTACTTTGTGAGGATCTGCTGCCACTTTTTCCTATT
GCATCCTCTTCAAAACTAAAGCCTTACAAGGTTCCTGCATCAGTATCTTACAATGAGGAC
ATTTTGCATGAGTATTCAGAGAGTGAAATACATCAACAGGCACTCACTGGGTACATATCC
TTCAAATTGCCAGATGATTGTTTCTCAATCGCAAACTGCATTGGTATTGTCAGGGGCCTT
AGACATGATTTAGGCAAACTAGAGGGCATATCGGATCCAGTAGAAGCAGCCCTCTTATGT
ATTCCTGATGGATATCACTGTATTGACCTCTCACTTTATAAAGAGGGTCAAATTGTTTTA
CTGTTAGATGAAACTGCAACCACTTCTGAGAGCTCTGGAAATGCGTACATGATGATTCTA
CAAGCCGGTGACCTCCCATTTGTATCACTTTCAAAATCTAACACTCTCAATTCTTGGAAA
CTTCACGAACTTCAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGCTCGAAGT
ATTCCACATTCTGTGGTTCCTCCCCTGGCAGTCAGTGCATCAAGAGGTGTAGCTTGTGTT
TTTGCTGCAAGAAAGCGCGCTTTAGTTTACATCTTGGATGAAGATGAAGATGAAGTCTCT
GATACAGAGTGA

Peptide Sequence

PEP ID

XP_016445991.1
PEP Infomation

PREDICTED: anaphase-promoting complex subunit 4-like isoform X2 [Nicotiana tabacum]
Sequence

MLCVSIGKSMGKRVPKMPGLVPGDSGFMDDGEDSFQELSNSSHQRYNILCSGDMDGSICF
NIFGIFPIGTVNIHNLVVSSSLSSSNAASRLLNASICKVALSKDLCHLVVLCNGELITDE
VEQGEGQHGLLGFHCLVLNTSIFSKRKTELHQVAQQASNIEDLSEVVRTSLSVMSKIWSD
AMHTFHEKFNTVSTLIIDHGLDSTPQDEFLSLLGGARASPPLHQFLENSLGEAGLKRVAK
AVNGAGKELQLIVLDHLQPAAEIIGFRIGELRGLSKWHARYKGIGLDEKLMDNATERAGM
LLVQVERFMRVLASVVQQFSNFFSWLLKSVKILMAEPSDQLPFNSELVIIFLKFLYDQDP
VRQLLEISEGDSSVEVDLEMMQRIKQLAHFGGFSDLEYLKRTLAEEFQQMESCFKGAFEM
PFSTISGKLLCEDLLPLFPIASSSKLKPYKVPASVSYNEDILHEYSESEIHQQALTGYIS
FKLPDDCFSIANCIGIVRGLRHDLGKLEGISDPVEAALLCIPDGYHCIDLSLYKEGQIVL
LLDETATTSESSGNAYMMILQAGDLPFVSLSKSNTLNSWKLHELQDSAIYLQLESEKARS
IPHSVVPPLAVSASRGVACVFAARKRALVYILDEDEDEVSDTE

Transcript Sequence

Gene sequence data has not been registered.